Nucl.eye.D
Description
Here you can find all datasets, scripts and trained models related to the Nucl.eye.D workflow presented in the publication - "Advanced image analysis methods for automated segmentation of subnuclear chromatin domains " !
The folder nucleyed.zip contains: - trained models (>Output>models)
- training data-set (>Input)
- all images (>Input)
The folder SupplementalMacros.zip contains all supplemental macro used for the analysis.
The file : The_Nucl_Eye_D.ipynb can be directly used following the noted instructions :
- Download The_Nucl_Eye_D.ipynb
- upload it to your Google Drive
- Open it with Google Colaboratory (Or if not already installed : Open with -> More applications -> Google Colaboratory -> Install)
(We recommend using Chrome browser)
For question about the script contact : nucl.eye.d@gmail.com
Enjoy using Nucl.eye.D !