Hyperspectral X-ray CT Voxelized TV reconstruction of a single, iodine-stained lizard head sample
Creators
- 1. University of Manchester
- 2. Science and Technology Facilities Council
- 3. University of Veterinary Medicine Vienna
- 4. Technical University of Denmark
Description
Dataset description
These datasets are voxel based reconstructions of hyperspectral CT data using the Core Imaging Library (CIL). They are stored as NeXus files (derived from hdf5) which can be read in, visualised and manipulated using CIL.
- PDHG_TV_1000_Sp_alpha_0.004.nxs
Is the solution after 1000 iterations of PDHG with TV applied in the spatial domain.
- PDHG_TV_1000_SpCh_alpha_0.003_beta_0.5.nxs
Is the solution after 1000 iterations of PDHG with TV applied both in the spatial domain, and in the energy (channel) domain.
Dataset intended use
These datasets are used in the CIL training notebook:
https://github.com/TomographicImaging/CIL-Demos/blob/main/examples/3_Multichannel/03_Hyperspectral_reconstruction.ipynb
They can be imported using CIL, with the following code snippet:
from cil.io import NEXUSDataReader
reader = NEXUSDataReader(file_name='path/to/data/PDHG_TV_1000_Sp_alpha_0.004.nxs')
data = reader.read()
Files
Files
(163.9 MB)
Name | Size | Download all |
---|---|---|
md5:da3c0e73445ab022dae05aec1174fee4
|
81.9 MB | Download |
md5:ee9627a52c57f73f068ae815bc2c0940
|
81.9 MB | Download |
Additional details
Related works
- Is compiled by
- Software: 10.5281/zenodo.4746198. (DOI)
- Is derived from
- Dataset: 10.5281/zenodo.4352943 (DOI)
Funding
- Tomographic Imaging EP/M022498/1
- UK Research and Innovation
- A Reconstruction Toolkit for Multichannel CT EP/P02226X/1
- UK Research and Innovation
- Next Generation Multi-Dimensional X-Ray Imaging EP/M010619/1
- UK Research and Innovation
- Tomographic Imaging: UK Collaborative Computational Projects EP/T026677/1
- UK Research and Innovation