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Published August 4, 2022 | Version 2.1.0
Software Open

nf-core/epitopeprediction: 2.1.0 - Nordring

Creators

  • 1. Medical Data Integration Center, Tübingen University Hospital
  • 2. @qbicsoftware
  • 3. Boehringer Ingelheim
  • 4. German Human Genome-Phenome Archive
  • 5. @SciLifeLab | Karolinska Institutet
  • 6. QBiC

Description

Added

#145 - Add functionality for handling gzip VCF files for #143 #166 - Add support for additional non-free NetMHC family tools #161 - Add rank values for prediction threshold and parameter use_affinity_thresholds to use affinity thresholds instead #160

Changed

#162 - Use most recent epytope release (3.1.0) #168 - Use MHC class information specified in sample sheet

Fixed

#135 - Fix unique variant annotation field handling #136 #144 - Fix VCF file parsing #142

See CHANGELOG for more information.

Files

nf-core/epitopeprediction-2.1.0.zip

Files (2.4 MB)

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md5:2f95ab6c2639f3491d077b37e73f467b
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Additional details

Related works

Is supplement to
https://github.com/nf-core/epitopeprediction/tree/2.1.0 (URL)