Published May 20, 2022 | Version v2
Dataset Open

Supplementary information for 'Crustacean leg regeneration restores complex microanatomy and cell diversity' by Almazán, Çevrim et al.

  • 1. Institut de Génomique Fonctionnelle de Lyon (IGFL), Centre National de la Recherche Scientifique (CNRS), École Normale Supérieure de Lyon, and Université Claude Bernard Lyon 1, 32 avenue Tony Garnier, 69007 Lyon, France
  • 2. European Molecular Biology Laboratory (EMBL), Heidelberg, Germany

Description

Animals can regenerate complex organs, yet this frequently results in imprecise replicas of the original structure. In the crustacean Parhyale, embryonic and regenerating legs differ in gene expression dynamics but produce apparently similar mature structures. We examine the fidelity of Parhyale leg regeneration using complementary approaches to investigate microanatomy, sensory function, cellular composition and cell molecular profiles. We find that regeneration precisely replicates the complex microanatomy and spatial distribution of external sensory organs, and restores their sensory function. Single-nuclei sequencing shows that regenerated and uninjured legs are indistinguishable in terms of cell type composition and transcriptional profiles. This remarkable fidelity highlights the ability of organisms to achieve identical outcomes via distinct processes.

Files

R_objects.zip

Files (6.7 GB)

Name Size Download all
md5:1edec0fe54a3a46ce0e1c311c8b66806
6.7 GB Preview Download
md5:7231571da428b7e24782cbfe5daa3bfc
5.6 MB Preview Download
md5:a17135bbcd7f4243e2a0a2018a50f9f4
87.2 kB Preview Download
md5:5e9a0f73cb7203ebc4da89faf21f9af7
1.2 kB Preview Download
md5:bfbc02e3f934ac0f99311af8f7c50650
28.4 MB Preview Download

Additional details

Related works

Is cited by
Preprint: 10.1101/2021.12.13.472338 (DOI)

Funding

European Commission
EvoCELL - Animal evolution from a cell type perspective: multidisciplinary training in single-cell genomics, evo-devo and in science outreach 766053
European Commission
reLIVE - Unraveling complex organ regeneration through live imaging and molecular profiling approaches 694918