scm6A-seq reveals single-cell landscapes of the dynamic m6A during oocyte maturation and early embryonic development

### The code is used in the linux system.
#Python environment and Cutadapt (version 2.10 or latest) needs to be installed before data processing.

Installation on a Debian-based Linux distribution (https://cutadapt.readthedocs.io/en/stable/installation.html)

################ If there are hunderds and more cells are in scm6A-seq data, tso-mix separation is needed.

sh ./scm6A-tsomix-separation.sh ${dir}/Test.fastq.gz

Expcted output file:
*index1.fastq
*index2.fastq
*index3.fastq
*N4.fastq

############## After tso-mix separation,cellular barcodes is needed for single cell reads isolation. Or if less than 20 cells in one library, single cell reads isolation is performed directlty.
### Test 10 thousand reads for single cell isolation with 6 cores, cost 1m24.507s

sh ./scm6A-SCbarcodes-isolation.sh

Expected output files:
*_${barcode}.fastq.gz