Published June 6, 2022
| Version v0.2
Dataset
Open
Toward a base-resolution panorama of the in vivo impact of cytosine methylation on transcription factor binding
Description
TF binding models built by JAMS (https://github.com/csglab/JAMS), ChIP-seq peak files (from ENCODE, Najafabadi et al. 2015, Schmitges et al. 2016, and Imbeault et al. 2017; called by MACS 1.4v), ChIP-seq pulldown and control tags from said peaks, input data for JAMS, and RCADE2 motifs for C2H2 zinc finger proteins.
Files
Files
(33.8 GB)
| Name | Size | Download all |
|---|---|---|
|
md5:d8404d5514383d7cff523a782f373ae1
|
638.3 MB | Download |
|
md5:9fabc8a6feaafd3a779151bee549f50f
|
26.8 MB | Download |
|
md5:fcf9aa22f4e59bc3e91240dcd1738b16
|
15.1 kB | Download |
|
md5:ed7888d051395c89048fefc52b6cd7b7
|
11.5 GB | Download |
|
md5:9f4ebe6b1ce3dcd6798299715617b3a7
|
16.4 GB | Download |
|
md5:3d9e3694c29e597a651dd91d03998492
|
61.4 MB | Download |
|
md5:5851129d93decc0589c7a6daf61af773
|
5.2 GB | Download |
Additional details
References
- Hernandez-Corchado, A., Najafabadi, H.S. Toward a base-resolution panorama of the in vivo impact of cytosine methylation on transcription factor binding. Genome Biol 23, 151 (2022). https://doi.org/10.1186/s13059-022-02713-y