Published April 5, 2022
| Version v1
Software
Open
Code archive: Phylogeny of early teleost lineages
Creators
- 1. Institut de Biologie de l'Ecole normale supérieure (IBENS), Département de Biologie, Ecole normale supérieure, CNRS, INSERM, Université PSL, 75005 Paris, France.
- 2. INRAE, LPGP, Rennes, France.
Description
This archive contains all the code and data to reproduce the phylogenies inferred in the associated manuscript: Parey et al., Genome structures resolve the early diversification of teleost fishes. We provide instructions and code (snakemake pipeline and jupyter notebook) to build teleost species trees from sequence and gene order data. In addition, we provide the reconstructed phylogenies in the Newick format, allowing to inspect the results without re-running the code.
Files
Files
(838.3 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:8763559f9b9d25a4b2673344279b5c11
|
838.3 MB | Download |