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PHIRI APP - WP7 - PHIRI Federated Research Infrastructure (FRI) - D7.1 Small-scale prototype of PHIRI federated infrastructure

Javier González-Galindo; Francisco Estupiñán-Romero; David Chichell-Ruíz; Juan González-García; Carlos Tellería-Orriols; Enrique Bernal-Delgado

Ronan Lyons; Pascal Derycke; Nienke Schutte; Sarah Aldridge
Work package leader(s)
Enrique Bernal-Delgado

D7.1 Small-scale prototype of PHIRI federated infrastructure

The PHIRI Federated Research Infrastructure (FRI) is supported by a containerized reproducible solution for data analysis to be deployed on-premises by each participant partner.

This solution is based on the identification of the relevant data sources for each cases study (including the demonstration pilot), the development of the common data models and the analytical pipelines, and enables the FAIR reporting of the rapid cycle outputs.

The small-scale prototype includes, in this version:

- Common data models for both the demonstration pilot and PHIRI use cases A to D (including their respective synthetic datasets) (see links in Additional notes)

- Data quality analysis scripts for all use cases

- Data analysis scripts for the demonstration pilot, and PHIRI Use Cases A, B, C, and D

*Rapid-cycle analysis is enabled through continuous data updates by participant partners deploying this prototype.

Current technical stack of the PHIRI FLI includes (x2) Docker containers, using:

General requirements for installing Docker (support)

  • Server: 1 server (or VM)
  • CPU: 1 CPU minimum (or 2 CPU for VM configuration)
  • GPU: No dedicated GPU required
  • RAM Memory: 4 GB minimum (8 GB recommended)
  • OS: Unix based (Linux or other) with Docker support

Specific PHIRI FDI Docker deployment requirements

  • RAM Memory: 8 GB minimum (16 GB recommended)


Links to other deliverables: 

Common Data Models for the different use cases (included in the PHIRI app):

RMarkdown scripts for analysis for the different use cases (included in the PHIRI app):


Note 1: The PHIRI FRI includes deployment instructions as a PDF document ("deploy_phiri_app.pdf") 

Note 2: The PHIRI FRI includes virtual machine installation and deployment instructions as a PDF document ("PHIRI_WP7_vm_installation_guide.pdf") 

Disclaimer: Please, note that we provide these scripts as they are, complying with the specifications of the Deliverable 7.1 "Small-scale prototype of PHIRI federated infrastructure" of PHIRI WP7 on "Building a federated research infrastructure for a rapid policy response" for the purposes of achieving the objectives specified in PHIRI WP6 and WP7. Software is provided as-is without further support out of the scope of the partners participating in the Demonstration Pilot or the use cases.
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