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Published March 9, 2022 | Version 1.0
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Seurat objects associated with the tonsil cell atlas

  • 1. CNAG-CRG

Description

In the context of the Human Cell Atlas, we have created a single-cell taxonomy of cell types and states in human tonsils. This repository contains the Seurat objects derived from this effort. In particular, we have datasets for each modality (scRNA-seq, scATAC-seq, CITE-seq, spatial transcriptomics), as well as cell type-specific datasets. Most importantly, this is the input that we used to create the HCATonsilData package, which allows programmatic access to all this datasets within R.

Files

Files (14.9 GB)

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md5:374be473d95564da6726d322b3e5a044
519.5 MB Download
md5:f2f3da3ac2fd9c661192f4524eb8c325
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md5:7cbea8a977b0d0f2c73498692892fd4c
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md5:cd9013a32e9bbc8d9a3bf97f83975ba0
10.2 MB Download
md5:bdfc889c83dbce193e7c7e8ae2b07ad4
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md5:fdbf00333bbfd00b709ebd1149b74109
1.2 GB Download
md5:fec56153cc67c86c037319c46e8d01bb
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md5:e6c66670bd4d51a89bf760b2cecb379c
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md5:45a5796a0b32ffd16523e011ea3ec007
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md5:bc5936e7b39ab742dfd4223a1128a6b7
221.3 MB Download