Software Open Access
Pervasive Transcription-coupled DNA repair in E. coli
Britney Martinez
Code used to analyze data in the study "Pervasive Transcription-coupled DNA repair in E. coli".
Files
(1.5 MB)
| Name | Size | |
|---|---|---|
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1.5fold-threshold-justification.ipynb
md5:757b469256941bb077b1513b6699e9b3 |
33.3 kB | Download |
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Average_CPD_counts.ipynb
md5:e3503f4ec6da0f81ef680551e2a6994c |
36.6 kB | Download |
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correlation_histograms.ipynb
md5:f1438241d59aae4a56ff226e9a305821 |
51.6 kB | Download |
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end gene high antisense.ipynb
md5:3e727a6178d17038a21ab22c61f553b4 |
42.4 kB | Download |
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frequency barplot.ipynb
md5:a861ef6b70a6321c5db3817ea21cf5f8 |
13.9 kB | Download |
|
mfd over expression.ipynb
md5:4d5dc15ecb5c48ef72d77982e88acc0c |
22.9 kB | Download |
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more_windows_endgene_highNTS.ipynb
md5:ac5a68145644ab41317e092653e058f8 |
41.2 kB | Download |
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NTS box plots.ipynb
md5:c394d374fdb79b89f3efc5786d976254 |
16.9 kB | Download |
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pos_count.py
md5:87d2b9fee62aa816446e66b8fb17436c |
3.0 kB | Download |
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repair where mfd increases NTS transcription.ipynb
md5:49628632d02d0a274cf58c2e549a00a7 |
41.7 kB | Download |
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rho box plots.ipynb
md5:806e81314690957530052e661f8beddf |
74.7 kB | Download |
|
rho scatterplots.ipynb
md5:fab1b571997b8efec5e91dac90b2fcd6 |
462.3 kB | Download |
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rho_mut_term_efficiency.ipynb
md5:70eb1dc626545a1b6053137f66c67aba |
58.0 kB | Download |
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transcription level boxplots (mfd).ipynb
md5:4a6b52ba15bec0bcfd3904df88b33ef5 |
46.0 kB | Download |
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UV-mfd rnaseq scatterplots.ipynb
md5:377cb73e9f9a4e341b31ebf84a1db98a |
290.2 kB | Download |
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UV-termination efficiency.ipynb
md5:be1ef01bc89eeedd878b50f6481256e2 |
84.9 kB | Download |
|
wt-lexa.ipynb
md5:bb50a77ea8ac24dacdec336719f05e4f |
70.9 kB | Download |
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wt-transcription level box plots .ipynb
md5:f8b51e6ef5774d23854e5bf6ebbcd164 |
45.1 kB | Download |
|
wt_mfd_rif plots.ipynb
md5:96146a9b98f40e582a0f3fce8ff8f0de |
40.4 kB | Download |
46
25
views
downloads
| All versions | This version | |
|---|---|---|
| Views | 46 | 46 |
| Downloads | 25 | 25 |
| Data volume | 1.7 MB | 1.7 MB |
| Unique views | 42 | 42 |
| Unique downloads | 9 | 9 |
Indexed in
- Publication date:
- February 5, 2022
- DOI:
-
- License (for files):
- Creative Commons Attribution 4.0 International