Genome-wide mapping of individual replication fork velocities using nanopore sequencing

These data are related to the "Genome-wide mapping of individual replication fork velocities using nanopore sequencing" manuscript by Theulot, Lacroix et al. (https://doi.org/10.1038/s41467-022-31012-0) and to the GitHub repository NanoForkSpeed (https://github.com/LacroixLaurent/NanoForkSpeed).

BT1_run4.tar.gz contains the nanopore reads from a typical experiment as fast5 files.

BT1_run4_mega.zip contains the result of the BrdU basecalling as described on the GitHub page in a modified bam file format as described on the GitHub page NanoForkSpeed/BrdU_Basecalling..

BT1_run4_Megalodon_00_smdata.rds contains the result of the parsing function for the modified bam file as described on the GitHub page NanoForkSpeed/BrdU_Basecalling.

BT1_run4_Megalodon_00_NFS_data.rds contains the result of the fork detection procedure on the BT1_run4_Megalodon_00_smdata.rds file as described on the GitHub page NanoForkSpeed/Forks_Detection.

BT1_run4_merged_NFS_data.rds contains the result of the NFS_merge function as described on the GitHub page NanoForkSpeed/Forks_Detection.