Published January 26, 2022
| Version v1
Dataset
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Bovine pangenome assemblies
Description
Assemblies used in analysis presented in https://doi.org/10.1101/2021.11.02.466900, containing the ARS-UCD1.2 reference genome and 32 assemblies compressed using agc.
Breed/species included are:
N - Nellore
B - Brown Swiss
G - Gaur
P - Piedmontese
H - Original Braunvieh (paternal)
O - Original Braunvieh (maternal if also an H assembly, otherwise primary assembly)
With the following breed/species and assembler combinations.
{H,O,N,B,G,P}_hifiasm {H,O,N,B,G,P}_shasta {O,N,B,G,P}_flye {O,N,B,G,P}_raven {O,N,B,G,P}_hicanu {O,N,B,G,P}_peregrine
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Additional details
Related works
- Is supplement to
- Preprint: 10.1101/2021.11.02.466900 (DOI)