Bovine pangenome assemblies

Assemblies used in analysis presented in https://doi.org/10.1101/2021.11.02.466900, containing the ARS-UCD1.2 reference genome and 32 assemblies compressed using agc.

Breed/species included are:

N - Nellore

B - Brown Swiss

G - Gaur

P - Piedmontese

H - Original Braunvieh (paternal)

O - Original Braunvieh (maternal if also an H assembly, otherwise primary assembly)

With the following breed/species and assembler combinations.

{H,O,N,B,G,P}_hifiasm {H,O,N,B,G,P}_shasta {O,N,B,G,P}_flye {O,N,B,G,P}_raven {O,N,B,G,P}_hicanu {O,N,B,G,P}_peregrine