Published December 22, 2021 | Version v1
Dataset Open

Dataset for "Ancient whale rhodopsin reconstructs dim-light vision over a major evolutionary transition: Implications for ancestral diving behaviour"

  • 1. University of Toronto

Description

Dataset files include:

- Alignment of rhodopsin (Rh1) sequences formatted for PAML

- Corresponding species tree in Newick format for PAML

- Ancestral Rh1 amino acid sequences (for Cetacean and Whippomorpha nodes) estimated with PAML (random sites, clade, and amino acid models), Datamonkey, and ProtASR

Files

Dungan-Chang-2021-Rh1Alignment-PAML.txt

Files (44.5 kB)

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md5:2907440d38e4130a6ba2be4463936c63
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md5:951c074cd13b9b2c42e1e92c79a1cc8a
459 Bytes Download
md5:4db1da63a76dd0604590cbca6dd2090d
4.5 kB Download