Software Open Access
coralCT: software tool to analyze computerized tomography (CT) scans of coral skeletal cores for calcification and bioerosion rates
DeCarlo, Thomas M; Cohen, Anne L
coralCT was developed by T.M. DeCarlo in the Cohen Lab at Woods Hole Oceanographic Institution ( http://www.whoi.edu/cohenlab/ ) with funding from the National Science Foundation (NSF) grants OCE 1041106 and OCE 1220529, and an NSF Graduate Research Fellowship awarded to Thomas DeCarlo.
coralCT is a MATLAB code for coral calcification and bioerosion analyses. Please see the license, tutorial, and example analysis within the GitHub repository.
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Recommended citation:
Please cite the Zenodo DOI for the coralCT program:
DeCarlo T.M., and Cohen A.L. (2016) coralCT: software tool to analyze computerized tomography (CT) scans of coral skeletal cores for calcification and bioerosion rates. Zenodo. doi:10.5281/zenodo.57855
The initial version of the program is described in the supplement to the following peer-reviewed publication:
DeCarlo T.M., Cohen A.L., Barkley H., Cobban Q., Young C., Shamberger K.E., Brainard R.E., Golbuu Y. (2015) Coral macrobioerosion is accelerated by ocean acidification and nutrients. Geology 43 (1) 7-10. doi:10.1130/G36147.1
| Name | Size | |
|---|---|---|
|
coralCT-1.1.zip
md5:a2c86087290b89867308905679e95988 |
10.8 MB | Download |
| All versions | This version | |
|---|---|---|
| Views | 390 | 280 |
| Downloads | 30 | 21 |
| Data volume | 325.6 MB | 227.8 MB |
| Unique views | 344 | 272 |
| Unique downloads | 27 | 21 |
Indexed in
- Publication date:
- July 14, 2016
- DOI:
-
- Keyword(s):
- coral calcification bioerosion computerized tomography
- Related identifiers:
- Cites:
10.1130/G36147.1 - Cited by:
10.1007/s00338-016-1483-3, 10.1038/srep44586, 10.1007/s00338-017-1566-9, 10.1126/science.aal3869, 10.1126/sciadv.1500328 - Supplement to:
https://github.com/tdecarlo19/coralCT/tree/1.1 - License (for files):
- MIT License