Other Open Access

Automated identification ofcell-type–specific genes and alternative promoters: results

Mickaël Mendez; Michael M Hoffman

Results accompanying the manuscript: Automated identification ofcell-type–specific genes and alternative promoters.

- CLA_results/zenodo_CLA_results/
    - 38_TF_CD_lnc_updated_sklearn: main results
    - 39_TF_500_1000_1500_2000_strat: results on TF with stratified bootstrap
    - 40_TF_500_1000_1500_2000_no_strat: results on TF without stratified bootstrap
    - 41_strat_vs_unstrat: script to compare results with stratified bootstrap or without stratified bootstrap
    - 42_skrrf_vs_df: comparisons between RRF and Seurat on scRNA-seq
    - 43_skrrf_vs_de_on_cage: comparisons between RRF and DESeq2 on CAGE
- CLA_data/zenodo_CLA_data: external data and scripts to download them
 

Files (3.7 GB)
Name Size
CLA_data.tar.gz
md5:7172c588865c1e95c3f42f2561b23d7e
2.1 GB Download
CLA_results.tar.gz
md5:8fad687562ec7845c8ee8e08fa375de8
1.6 GB Download
48
1
views
downloads
All versions This version
Views 4848
Downloads 11
Data volume 1.6 GB1.6 GB
Unique views 4343
Unique downloads 11

Share

Cite as