Published November 29, 2021
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Automated identification ofcell-type–specific genes and alternative promoters: results
Creators
- 1. University of Toronto
- 2. Princess Margaret Cancer Center
Description
Results accompanying the manuscript: Automated identification ofcell-type–specific genes and alternative promoters.
- CLA_results/zenodo_CLA_results/
- 38_TF_CD_lnc_updated_sklearn: main results
- 39_TF_500_1000_1500_2000_strat: results on TF with stratified bootstrap
- 40_TF_500_1000_1500_2000_no_strat: results on TF without stratified bootstrap
- 41_strat_vs_unstrat: script to compare results with stratified bootstrap or without stratified bootstrap
- 42_skrrf_vs_df: comparisons between RRF and Seurat on scRNA-seq
- 43_skrrf_vs_de_on_cage: comparisons between RRF and DESeq2 on CAGE
- CLA_data/zenodo_CLA_data: external data and scripts to download them
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