Published March 29, 2019 | Version v1
Dataset Open

Liver and Blood Expression Prediction Generated for Opportunities and challenges for transcriptome-wide association studies

Description

db files are in sqlite format and contain weights to calculate genetic predictors of gene expression

Blood, Liver indicate the tissue where the RNA was extracted from

Crohns and LDL indicate that prediction models were generated using SNPs available in the GWAS summary results used in the paper (Wainberg et al https://doi.org/10.1038/s41588-019-0385-z)

*txt.gz filex contain covariances between SNPs needed to run the summary version of PrediXcan or other TWAS methods

Information about the RNAseq data can be found here https://pubmed.ncbi.nlm.nih.gov/27540175/

Sample size n=522

Files

Files (86.0 MB)

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