Dataset Open Access

Alignment files for coverage benchmarks: Illumina and Nanopore sequencing datasets

Telatin, Andrea

  • cpara-illumina-noseq.bam and cpara-ont-noseq.bam: BAM files produced aligning the raw reads produced respectively by Illumina NextSeq and ONT Nanopore sequencing of an isolate of C. parapsilosis to evaluate the coverage calculations using real datasets.*
  • HG00258.bam: Exome sequencing from the 1000 Genomes Project (Clarke et al 2016 https://doi.org/10.1093/nar/gkw829).
  • panel_01.bam: targeted sequencing of a Human gene panel of 16 genes.*

* Sequences and qualities have been removed

Files (12.5 GB)
Name Size
cpara-illumina-noseq.bam
md5:830b5d827005979df63a490a17617e3b 		257.6 MB Download
cpara-ont-noseq.bam
md5:a6660d1a9fbf0ceddc91b0de62a5c88c 		20.7 MB Download
HG00258.bam
md5:a2403411d975d36c49c4f5c24a5b75ea 		12.2 GB Download
panel_01.bam
md5:670bbb5f2e96965e8b1d05a8cef3bb04 		10.9 MB Download
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Publication date:
November 1, 2021
DOI:
10.5281/zenodo.5636944

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Grants:
Research Councils UK:
  • Quadram Institute Bioscience UKRI Innovation Fellowships: BBSRC Flexible Talent Mobility Accounts (BB/R506552/1)
  • CLIMB-BIG-DATA: A Cloud Infrastructure for Big-Data Microbial Bioinformatics (MR/T030062/1)
License (for files):
Creative Commons Attribution 4.0 International

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Version 1.0 10.5281/zenodo.5636944 Nov 1, 2021
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