Published July 14, 2021 | Version v2
Video/Audio Open

Outputs from new methods for 3D+time cell image segmentation and tracking

  • 1. University of Nigeria, Nsukka, NIGERIA
  • 2. Slovak University of Technology in Bratislava, SLOVAKIA
  • 3. BioEmergences Laboratory (USR 3695), CNRS, University Paris-Saclay, Gif-sur-Yvette, FRANCE

Description

Segmentation and tracking of 3D+time microscopy images of cell nuclei within the zebrafish pectoral fin.

The file named 7_cells_moving_in_70_frames_orig.avi is a 70-frame video of a group of cells moving in time, the file named 7_cells_moving_in_70_frames.avi has the result of 4D segmentation, using our new segmentation methods, for seven cells (colored black) moving in time, and the file _tracking_of_7_cell_in_70_frames.mp4 has the tracking of these seven cells. 

Additionally, the file named group_of_cells_moving_in_70_frames_orig.avi is a 70-frame video of a group of cells moving in time, the file named group_of_cells_moving_in_70_frames.avi has the result of 4D segmentation, using our new segmentation methods, for the group of cells (colored black) moving in time and the file _tracking_of_group_of_cell_in_70_frames.gif has the tracking of this group of cells. 

Files

_tracking_of_7_cell_in_70_frames.mp4

Files (106.0 MB)

Name Size Download all
md5:7635a93e58776ce38e7a5ea8e5b8a2d0
25.7 MB Download
md5:5639b1a96fa2dee4798c917e170b2483
25.7 MB Download
md5:bab403f923833e012480dfa7358a6d58
372.4 kB Preview Download
md5:96a2fb6f2d2608bbd8e3cccd87ae7bc5
3.2 MB Preview Download
md5:59697fc95af59eb42773565dfdeba40b
25.9 MB Download
md5:84e3781f867bf5143281e7cb63f4619f
25.1 MB Download

Additional details

Funding

ImageInLife – Training European Experts in Multilevel Bioimaging, Analysis and Modelling of Vertebrate Development and Disease 721537
European Commission