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Published June 3, 2016 | Version v1.0.0-M4
Software Open

mg7: mg7 v1.0.0-M4

  • 1. Era7 Bioinformatics
  • 2. oh no sequences! - Era7 bioinformatics
  • 3. ohnosequences!, Era7 Bioinformatics
  • 4. Gitter

Description

This milestone adds some important features and improves the output data presentation. Here are the main changes since the v1.0-M3 release:

  • New features:

    • #65: Added average pident (percentage of identity) column to the assignment and counts tables
    • #66: Combining multiple reference DBs
    • #68: Assignment now can handle multiple taxas per reference sequence
    • #72: BBH is now evaluated as the lowest common ancestor of the most rank-specific nodes of the max-bitscore hits
    • #70: Replaced db.rnacentral library dependency with the ReferenceDB class
  • Various output tables improvements:

    • #69: Moved lineage column to the 1st position
    • #74: Added rank number for ordering rows by rank
    • #75, #76: Changed frequency counts to percentage (i.e. 100-based)

See the full list of pull requests merged in this release in the v1.0-M4 milestone.

Files

mg7-v1.0.0-M4.zip

Files (6.7 MB)

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