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Published August 13, 2021 | Version v1
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Phylogeny of Phyllachora species on bamboo and P. cephalostachyi sp. nov. from China

Creators

  • 1. Acadamic Institute of Yunnan Federation of Supply and Marketing Cooperatives, Kunming 650223, China & Kunming Edible Fungi Institute of All China Federation of Supply and Marketing Cooperatives, Kunming 650223, China
  • 2. General Station of Forest and Grassland Pest Management, National Forestry and Grassland Administration, Shenyang 110034, China College of Life Science, Southwest Forestry University, Kunming 650224, China & yhy1689@163.com; https://orcid.org/0000-0003-1590-9316
  • 3. fungixil@163.com; https://orcid.org/0000-0001-7112-1895
  • 4. Station of Forest and Grassland Pest Control and Quarantine, Shenyang 110034, China & wuhao7777@icloud.com; https://orcid.org/0000-0002-1396-1957
  • 5. Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand & Center of Excellence in Bioresources for Agriculture, Industry and Medicine, Department of Biology, Faculty of Science, Chiang Mai University, 50200, Thailand

Description

Li, Xiao-Ling, Yu, Hai-Ying, Luo, Xi, Wu, Hao, Zhao, Chun-Yan, Promputtha, Itthayakorn, Sun, Da-Feng (2021): Phylogeny of Phyllachora species on bamboo and P. cephalostachyi sp. nov. from China. Phytotaxa 514 (2): 158-166, DOI: 10.11646/phytotaxa.514.2.7, URL: http://dx.doi.org/10.11646/phytotaxa.514.2.7

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Identifiers

LSID
urn:lsid:plazi.org:pub:FFF86E488A78316BFFAB195C73032A46

Cites
Publication: 10.1071/APP9930111 (DOI)
Publication: 10.5943/mycosphere/8/10/2 (DOI)
Publication: 10.1093/molbev/mst010 (DOI)
Publication: 10.13346/j.mycosystema.180054 (DOI)
Publication: 10.11646/phytotaxa.425.2.2 (DOI)
Publication: 10.2307/3754878 (DOI)
Publication: 10.1071/BT9670271 (DOI)
Publication: 10.1071/bt9710207 (DOI)
Publication: 10.1071/BT9640265 (DOI)
Publication: 10.1016/S0953-7562(09)80409-7 (DOI)
Publication: 10.1093/bioinformatics/btu033 (DOI)
Publication: 10.1111/j.0014-3820.2002.tb00191.x (DOI)
Publication: 10.5943/mycosphere/8/8/6 (DOI)
Publication: 10.1128/jb.172.8.4238-4246.1990 (DOI)
Publication: 10.1016/B978-0-12-372180-8.50042-1 (DOI)
Publication: 10.11646/phytotaxa.392.3.2 (DOI)
Has part
Figure: 10.5281/zenodo.5314898 (DOI)
Figure: 10.5281/zenodo.5314902 (DOI)

References

  • Awati, J.B. & Kulkarni, U.K. (1972) A new species of Phyllachora Nke. India. Current Science 41: 31-32.
  • Cannon, P.F. (1991) A revision of Phyllachora and some similar genera on the host family Leguminosae. Mycological Papers 163: 1-302. https://doi.org/10.1071/APP9930111
  • Dayarathne, M.C., Maharachchikumbura, S.S.N., Jones, E.B.G., Goonasekara, I.D., Bulgakov, T.S., Al-Sadi, A.M., Hyde, K.D., Lumyong, S. & McKenzie, E.H.C. (2017) Neophyllachora gen. nov. (Phyllachorales), three new species of Phyllachora from Poaceae and resurrection of Polystigmataceae (Xylariales). Mycosphere 8: 1598-1625. https://doi.org/10.5943/mycosphere/8/10/2
  • Doyle, J.J. & Doyle, J.L. (1987) A rapid DNA isolation procedure from small quantities of fresh leaf tissues. Phytochemical Bulletin 19: 11-15.
  • Hino, I. & Katumoto, K. (1955) Illustrationes fungorum bambusicolorum III. Bulletin of the Faculty of Agriculture, Yamaguti University 6: 29-69.
  • Katoh, K. & Standley, D.M. (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution 30: 772-780. https://doi.org/10.1093/molbev/mst010
  • Li, X.L., Yang, Z.X., Wang, X.X., Wang, Y. & Li, C.Y. (2018) Two new species of graminicolous Phyllachora. Mycosystema 37: 1127- 1132. https://doi.org/10.13346/j.mycosystema.180054
  • Li, X.L., Wu, S.R., Wang, C.L., Feng, Y.L., Zhao, C.Y., Chen, Z.Q., Yu, J.F., Luo, R., Promputtha, I. & Sun, D.F. (2019) Two new species of Phyllachora (Phyllachoraceae, Phyllachorales) on bamboo from China. Phytotaxa 425: 78-86. https://doi.org/10.11646/phytotaxa.425.2.2
  • Orton, C.R. (1944) Graminicolous species of Phyllachora in North America. Mycologia 36: 18-53. https://doi.org/10.2307/3754878
  • Parbery, D.G. (1967) Studies on graminicolous species of Phyllachora Nke. in Fckl. V. A taxonomic monograph. Australian Journal of Botany 15: 271-375. https://doi.org/10.1071/BT9670271
  • Parbery, D.G. (1971) Studies on graminicolous species of Phyllachora Nke. in Fckl. VI. Additions and corrections to Part V. Australian Journal of Botany 19: 207-235. https://doi.org/10.1071/bt9710207
  • Parbery, D.G. & Langdon, R.F.N. (1964) Studies on graminicolous species of Phyllachora Fckl. IV. Evaluation of the criteria of species. Australian Journal of Botany 12: 265-281. https://doi.org/10.1071/BT9640265
  • Patouillard, N. (1914) Specific descriptor: megastroma. Bulletin de la Societe Mycologique de France 30: 345-349.
  • Rambaut, A. (2012) Fig.Tree. Tree figure drawing tool. v. 1.4.0. Available from: http://tree.bio.ed.ac.uk/software/figtree/ (accessed 12 August 2021)
  • Rehm, H. (1914) Ascomycetes Philippineses-V. Leaflets of Philippine Botany 6: 2191-2195.
  • Rehner, S.A. & Samuels, G.J. (1994) Taxonomy and phylogeny of Gliocladium analysed from nuclear large subunit ribosomal DNA sequences. Mycological Research 98: 625-634. https://doi.org/10.1016/S0953-7562(09)80409-7
  • Saccardo, P.A. (1902) Sylloge Fungorum Omnium Hucusque Cognitorum, vol. 16. Patavii, Italy.
  • Saccardo, P.A. (1905) Sylloge Fungorum Omnium Hucusque Cognitorum, vol. 17. Patavii, Italy.
  • Saccardo, P.A. (1926) Sylloge Fungorum Omnium Hucusque Cognitorum, vol. 24. Patavii, Italy.
  • Sawada, K. (1943) Descriptive catalogue of Taiwan (Formosan) fungi VIII. Report Government Research Institute, Department of Agriculture Formosa 85: 1-131.
  • Stamatakis, A. (2014) RaxML version 8: a tool for phylogenetic analysis and post analysis of large phylogenies. Bioinformatics 30: 1312-1313. http://dx.doi.org/10.1093/bioinformatics/btu033
  • Swofford, D.L. (2003) PAUP*: phylogenetic analysis using parsimony (*and other methods). Version 4.0b10. Sinauer Associates, Sunderland. https://doi.org/10.1111/j.0014-3820.2002.tb00191.x
  • Tai, F.L. (1979) Sylloge Fungorum Sinicorum. Science Press, Beijing.
  • Tamakaew, N., Maharachchikumbura, S.S.N., Hyde, K.D. & Cheewangkoon, R. (2017) Tar spot fungi from Thailand. Mycosphere 8: 1054-1058. https://doi.org/10.5943/mycosphere/8/8/6
  • Theissen, F. & Sydow, H. (1915) Die Dothideales. Kritisch-systematische riginaluntersuchungen. Annales Mycologici 13: 147-746.
  • Thompson, J.D., Higgins, D.G. & Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22: 4673-4680.
  • Vilgalys, R. & Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4238-4246. https://doi.org/10.1128/jb.172.8.4238-4246.1990
  • White, T.J., Bruns, T., Lee, S.J. & Taylor, J.L. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: a guide to methods and applications 18: 315-322. https://doi.org/10.1016/B978-0-12-372180-8.50042-1
  • Wu, J.W., Li, C.Y., Zhang, T., Zhang, L.Y. & Liu, L. (2013) Record of a new species of Phyllachora. Journal of Yunnan Agricultural University 4: 590-591.
  • Yang, C.L., Xu, X.L., Liu, Y.G., Hyde, K.D. & McKenzie, E.H.C. (2019) A new species of Phyllachora (Phyllachoraceae, Phyllachorales) on Phyllostachys heteroclada from Sichuan, China. Phytotaxa 392: 186-196. https://doi.org/10.11646/phytotaxa.392.3.2
  • Zhang, Z.Y. & Zhang, T. (2014) Flora Fungorum Sinicorum. Vol. 46: Phyllachora. Science Press, Beijing.