Published November 1, 2013 | Version v1
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Is Leopoldamys neilli (Rodentia, Muridae) a synonym of Leopoldamys herberti? A reply to Balakirev et al. (2013)

  • 1. Conservation Genetics Unit, University of Liege, Liège, Belgium. E-mail: alice.latinne@ulg.ac.be
  • 2. INRA, UMR1062 CBGP, Campus international de Baillarguet, Montferrier-sur-Lez, France
  • 3. Environment and Resources Technology Department, Thailand Institute of Scientific and Technological Research, Pathum Thani, Thailand
  • 4. Doi Chiangdao Wildlife Research Station, Chiang Mai, Thailand
  • 5. Bung Boraphet Wildlife Research Station, Nakhon Sawan, Thailand
  • 6. Khlong Saeng Wildlife Research Station, Surat Thani, Thailand
  • 7. IRD, UMR ESPACE-DEV (IRD, UM2, UAG, UR), Station SEAS-OI, F-97410 Saint-Pierre, France
  • 8. Institut des Sciences de l'Evolution, CNRS-IRD-UM2, Université de Montpellier 2, F-34093, Montpellier, France & Walai Rukhavej Botanical Research Institute, Mahasarakham University, Maha Sarakham 44150 Thailand
  • 9. Conservation Genetics Unit, University of Liege, Liège, Belgium. E-mail: alice.latinne@ulg.ac.be & INRA, UMR1062 CBGP, Campus international de Baillarguet, Montferrier-sur-Lez, France

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Latinne, Alice, Chaval, Yannick, Waengsothorn, Surachit, Rojanadilok, Prateep, Eiamampai, Krairat, Sribuarod, Kriangsak, Herbreteau, Vincent, Morand, Serge, Michaux, Johan R. (2013): Is Leopoldamys neilli (Rodentia, Muridae) a synonym of Leopoldamys herberti? A reply to Balakirev et al. (2013). Zootaxa 3731 (4): 589-598, DOI: 10.11646/zootaxa.3731.4.10

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References

  • Balakirev, A.E., Abramov, A.V. & Rozhnov, V.V. (2013) Revision of the genus Leopoldamys (Rodentia, Muridae) as inferred from morphological and molecular data, with a special emphasis on the species composition in continental Indochina. Zootaxa, 3640, 521-549. http://dx.doi.org/10.11646/zootaxa.3640.4.2
  • Ellerman, J.R. (1941) The families and genera of living rodents. Vol. 2. Family Muridae. British Museum (Natural History), London, 690 pp.
  • Excoffier, L., Laval, G. & Schneider, S. (2005) Arlequin (version 3.0): An integrated software package for population genetics data analysis. Evolutionary Bioinformatics, 1, 47-50.
  • Galan, M., Pages, M. & Cosson, J.-F. (2012) Next-Generation sequencing for rodent barcoding: species identification from fresh, degraded and environmental samples. PLoS ONE, 7, e48374. http://dx.doi.org/10.1371/journal.pone.0048374
  • Gilbert, M.T.P., Bandelt, H.J., Hofreiter, M. & Barnes, I. (2005) Assessing ancient DNA studies. Trends in Ecology & Evolution, 20, 541-544. http://dx.doi.org/10.1016/j.tree.2005.07.005
  • Guindon, S., Dufayard, J.F., Lefort, V., Anisimova, M., Hordijk, W. & Gascuel, O. (2010) New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Systematic Biology, 59, 307-321.
  • Kloss, C.B. (1916) On a collection of mammals from Siam. Journal of the Natural History Society of Siam, 2, 1-32.
  • Latinne, A., Waengsothorn, S., Herbreteau, V. & Michaux, J.R. (2011) Evidence of complex phylogeographic structure for the threatened rodent Leopoldamys neilli, in Southeast Asia. Conservation Genetics, 12, 1495-1511. http://dx.doi.org/10.1007/s10592-011-0248-3
  • Latinne, A., Waengsothorn, S., Rojanadilok, P., Eiamampai, K., Sribuarod, K. & Michaux, J.R. (2012) Combined mitochondrial and nuclear markers revealed a deep vicariant history for Leopoldamys neilli, a cave-dwelling rodent of Thailand. PLoS ONE, 7, e47670. http://dx.doi.org/10.1371/journal.pone.0047670
  • Latinne, A., Waengsothorn, S., Rojanadilok, P., Eiamampai, K., Sribuarod, K. & Michaux, J.R. (2013) Diversity and endemism of Murinae rodents in Thai limestone karsts. Systematics and Biodiversity, 11, 323-344. http://dx.doi.org/10.1080/14772000.2013.818587
  • Marshall, J.D. (1977) Rats and mice of Thailand. In: Lekagul, B. & McNeely, J.A. (Eds.), Mammals of Thailand. Saha Karn Bhaet Bangkok, Thailand, pp. 395-490.
  • Musser, G.G. & Carleton, M. (2005) Superfamily Muroidea. In: Wilson, D.E. & Reeder, D.M. (Eds.), Mammal species of the World: a taxonomic and geographic reference. Johns Hopkins University Press, Baltimore, pp. 894-1531.
  • Pages, M., Chaval, Y., Herbreteau, V., Waengsothorn, S., Cosson, J.F., Hugot, J.P., Morand, S. & Michaux, J. (2010) Revisiting the taxonomy of the Rattini tribe: a phylogeny-based delimitation of species boundaries. BMC Evolutionary Biology, 10, 184. http://dx.doi.org/10.1186/1471-2148-10-184
  • Posada, D. & Crandall, K.A. (1998) MODELTEST: testing the model of DNA substitution. Bioinformatics, 14, 817-818. http://dx.doi.org/10.1093/bioinformatics/14.9.817
  • Robinson, H.C. & Kloss, C.B. (1922) V.-New mammals from French Indo-China and Siam. Journal of Natural History Series 9, 9, 87-99. http://dx.doi.org/10.1080/00222932208632642
  • Ronquist, F. & Huelsenbeck, J.P. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572-1574. http://dx.doi.org/10.1093/bioinformatics/btg180
  • Sarkar, I.N., Planet, P.J. & Desalle, R. (2008) CAOS software for use in character-based DNA barcoding. Molecular Ecology Resources, 8, 1256-1259. http://dx.doi.org/10.1111/j.1755-0998.2008.02235.x
  • Swofford, D.L. (1998) PAUP*. Phylogenetic Analysis Using Parsimony, (*and other methods). Version 4. Sinauer Associates, Sunderland, Massachusetts.
  • Teletchea, F., Bernillon, J., Duffraisse, M., Laudet, V. & Hanni, C. (2008) Molecular identification of vertebrate species by oligonucleotide microarray in food and forensic samples. Journal of Applied Ecology, 45, 967-975. http://dx.doi.org/10.1111/j.1365-2664.2007.01415.x
  • Thomas, O. (1882) Description of a new species of rat from China. Proceedings of Zoological Society of London, 50, 587-588.
  • Thomas, O. (1887) Description of a new rat from North Borneo. Annals and Magazine of Natural History, series 5, 20, 269- 270. http://dx.doi.org/10.1080/00222938709460053
  • Waengsothorn, S., Kenthao, A., Latinne, A. & Hugot, J.P. (2009) Rodents within the Centre for Thai National Reference Collections (CTNRC), past, present and future. Kasetsart Journal Natural Sciences, 43, 118-124.