Published September 21, 2021
| Version 1.0
Journal article
Open
STAT: A fast, scalable, MinHash-based k-mer tool to assess Sequence Read Archive next generation sequence submissions.
Authors/Creators
- 1. National Center for Biotechnology Information National Library of Medicine, National Institutes of Health
Description
This contains three different packages reported in our Genome Biology article.
- STATGenomeBiology.tar.gz - a very large package that contains all source and data files required for reproducing the accuracy test results reported in our article.
- aligns_to binary - this is a pre-compiled binary of aligns_to (with NGS support so SRA accessions can be used) compiled on a CentOS Linux release 7.9.2009 host.
- STATGitHub.tar.gz - this contains the GitHub repo/branch ngs-tools/tax noted in the paper - see the README.md file (once unpacked) at ngs-tools/tools/tax/, and the two files build.sh and quickbuild.sh in the same location.
Files
Files
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