Published May 10, 2021
| Version 0.10.15
Software
Open
ICB-DCM/pyABC: pyABC 0.10.15
- 1. Helmholtz Munich + TUM
- 2. IRU Biomathematics @ Uni Bonn
- 3. CRTD, TU Dresden
Description
Sampler:
- Allow redis dynamical sampler to only wait for relevant particles after a generatio, giving a speed-up without drawbacks (#448)
- Add option to limit number of delayed look-ahead samples to limit memory usage (#428)
Logging:
- Standardize output of floats (#450)
- Use hierarchical logging (ABC.Submodule) (#417)
General:
- Refactor: Remove deprecated
nr_samples_per_parameter
, internal simplifications (#422) - Tidy up and minimize dependencies (#436, #441)
- External: Remove simulation files after collecting results (#434)
- Make feather/pyarrow dependency optional for older hardware (#442)
Documentation:
- Add description of JupyterHub to documentation (#439)
CI:
- Test webserver basic functionality
- Rerun stochastically failing tests (all #436)
- Test whether dataframe storage routines work properly (#442)
Files
ICB-DCM/pyABC-0.10.15.zip
Files
(19.5 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/ICB-DCM/pyABC/tree/0.10.15 (URL)