Published January 30, 2016 | Version v1
Software Open

PyMICE: 0.2.3

Authors/Creators

  • 1. Laboratory of Neuroinformatics; Nencki Institute of Experimental Biology of Polish Academy of Sciences
  • 2. Laboratory of Emotions Neurobiology; Nencki Institute of Experimental Biology of Polish Academy of Sciences

Description

PyMICE is a Python® library for mice behavioural data analysis.

The library can be used for loading and analysing of data obtained from IntelliCage™ system in an intuitive way in Python programming language.

The library provides user with an object oriented application programming interface (API) and a data abstraction layer. It also comes with auxiliary tools supporting development of analysis workflows, like data validators and a tool for workflow configuration.

We ask that PyMICE resource identifier (RRID:nlx_158570) is provided in any published research making use of PyMICE.

For more details please see the project website: https://neuroinflab.wordpress.com/research/pymice/ .


Auhors of the library

  • Jakub Dzik
  • Szymon Łęski


Author of the tutorial data

  • Alicja Puścian

Notes

Acknowledgement: JD and SŁ supported by Symfonia NCN grant: UMO-2013/08/W/NZ4/00691. AP supported by a grant from Switzerland through the Swiss Contribution to the enlarged European Union (PSPB-210/2010 to Ewelina Knapska and Hans-Peter Lipp).

Files

PyMICE-0.2.3.zip

Files (9.7 MB)

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Additional details

Related works

Is previous version of
10.5281/zenodo.47305 (DOI)
Is supplement to
https://github.com/Neuroinflab/PyMICE/tree/v0.2.3 (URL)
https://pypi.python.org/pypi/PyMICE/0.2.3 (URL)
https://neuroinflab.wordpress.com/research/pymice/ (URL)