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nf-core/eager: [2.3.3] - Aalen (Patch) - 2021-04-08

James A. Fellows Yates; Alexander Peltzer; Thiseas C. Lamnidis; Maxime Borry; ZandraFagernas; Ido Bar; Aida Andrades Valtueña; Evan Floden; nf-core bot; alexandregilardet; Maxime Garcia; Patrick Hüther; Phil Ewels; Gisela Gabernet; sc13-bioinf; Charles Plessy; Harshil Patel; Olga Botvinnik; Selina Carlhoff; Alex Hübner

Added

  • #349 - Added option enabling platypus formatted output of pmdtools misincorporation frequencies.
Fixed
  • #719 - Fix filename for bam output of mapdamage_rescaling
  • #707 - Fix typo in UnifiedGenotyper IndelRealigner command
  • Fixed some Java tools not following process memory specifications
  • Updated template to nf-core/tools 1.13.2
  • #711 - Fix conditional execution preventing multivcfanalyze to run
  • #714 - Fixes bug in nuc contamination by upgrading to latest MultiQC v1.10.1 bugfix release
Dependencies Deprecated

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nf-core/eager-2.3.3.zip
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