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Published March 14, 2021 | Version v3.11.2
Software Open

pymc-devs/pymc3: PyMC3 3.11.2 (14 March 2021)

Creators

  • 1. MSU EF
  • 2. @google
  • 3. IMASL-CONICET
  • 4. pymc-labs
  • 5. @monetate
  • 6. Innova S.p.A.
  • 7. Forschungszentrum Jülich GmbH
  • 8. Laboro.AI
  • 9. Novartis Institutes for Biomedical Research
  • 10. University of Potsdam

Description

PyMC3 3.11.2 (14 March 2021) New Features

  • pm.math.cartesian can now handle inputs that are themselves >1D (see #4482).
  • Statistics and plotting functions that were removed in 3.11.0 were brought back, albeit with deprecation warnings if an old naming scheme is used (see #4536). In order to future proof your code, rename these function calls:
    • pm.traceplot → pm.plot_trace
    • pm.compareplot → pm.plot_compare (here you might need to rename some columns in the input according to the arviz.plot_compare documentation)
    • pm.autocorrplot → pm.plot_autocorr
    • pm.forestplot → pm.plot_forest
    • pm.kdeplot → pm.plot_kde
    • pm.energyplot → pm.plot_energy
    • pm.densityplot → pm.plot_density
    • pm.pairplot → pm.plot_pair
Maintenance
  • ⚠ Our memoization mechanism wasn't robust against hash collisions (#4506), sometimes resulting in incorrect values in, for example, posterior predictives. The pymc3.memoize module was removed and replaced with cachetools. The hashable function and WithMemoization class were moved to pymc3.util (see #4525).
  • pm.make_shared_replacements now retains broadcasting information which fixes issues with Metropolis samplers (see #4492).

Release manager for 3.11.2: Michael Osthege (@michaelosthege)

Files

pymc-devs/pymc3-v3.11.2.zip

Files (2.1 MB)

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Additional details

Related works

Is supplement to
https://github.com/pymc-devs/pymc3/tree/v3.11.2 (URL)