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Published March 4, 2021 | Version v1.1.1
Software Open

Multi-omics data harmonisation for the discovery of COVID-19 drug targets

Creators

  • 1. Monash University, Australia
  • 2. University of Melbourne, Australia

Description

We present a generic, flexible, reproducible, open-access data harmonisation framework that can be scaled out to future multi-omics analysis to study a phenotype in a holistic manner.

Our git repository along with code, documentation and sample data on two case studies are available with install instructions.

Docker and singularity images are available.

The pipeline can also be installed as an R package:

install.packages("devtools")
library(devtools)
install_github("mixOmicsTeam/mixOmics")
install_gitlab("tyagilab/sars-cov-2", subdir="multiomics", build_vignettes=TRUE)

Files

Files (163.0 MB)

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md5:3561031d2522f315be7623af75fad3f5
163.0 MB Download

Additional details

Funding

National Health and Medical Research Council
Microbiome biomarkers of human disease: novel computational methods to facilitate therapeutic developments GNT1159458