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A compilation of pathway gene sets: dhimmel/pathways v1.1

Daniel S. Himmelstein

This release contains minor updates to our compilation of human pathway gene sets. MSigDB was updated from 5.0 to 5.1 which had no effect. WikiPathways was updated which added versioning to pathway IDs. Entrez Genes are now sorted as integers in data/pathways.tsv. This release contains 1624 pathways.

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Publication date:
February 5, 2016
DOI:
10.5281/zenodo.45588

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10.5281/zenodo.45588

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Keyword(s):
pathways gene sets MSigDB WikiPathways Rephetio
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Versions

Version v2.0 10.5281/zenodo.48810 Apr 2, 2016
Version v1.1 10.5281/zenodo.45588 Feb 5, 2016
Version v1.0 10.5281/zenodo.31834 Oct 5, 2015
Cite all versions? You can cite all versions by using the DOI 10.5281/zenodo.593860. This DOI represents all versions, and will always resolve to the latest one. Read more.

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