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Published January 26, 2021 | Version v0.25.0
Software Open

vib-singlecell-nf/vsn-pipelines: v0.25.0

  • 1. VIB-KU Leuven Center for Brain & Disease Research
  • 2. @aertslab

Description

Major updates:

  • Update project to run on Nextflow >= 20.10.0 (#253)
  • Cell barcode -1 suffixes are no longer removed by default (#288)

Publishing system updates:

  • Streamline publish workflow (remove proxy process)
  • Avoid copying internally when publishing a file
  • Allow files to be published across filesystems when params.publish.mode is 'copy' (#265)

Other:

  • Documentation updates
  • Disable loom validation in file converter (#286)
  • Fix process labels and run times in cellranger, pcacv
  • Add CI test for parameter exploration
  • Fixes for CI tests failing when using hard links
  • Set CI tests to run on pushes and PRs to develop
  • Use sparse loading from loom files
  • Update utilities Docker image

Files

vib-singlecell-nf/vsn-pipelines-v0.25.0.zip

Files (1.0 MB)

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md5:a33220d68024fad9f590936298848ba2
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Additional details