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Code for Bauer, R., Clowry, G. and Kaiser, M., 2021. Creative destruction: a basic computational model of cortical layer formation. Cerebral Cortex

Roman Bauer

This code specifies a computational model that can account for the development of layer-specific neuron numbers in various different cortical structures. It is agent-based and is initiated from a small homogeneous pool of precursor cells. The file Lamination.java includes the main function that induces the activation of multiple "modules" within a gene regulatory network.

Instructions to run the code from Ubuntu 16.04 are provided in the zip file
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LayerFormationCode.zip
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