Published December 17, 2020
| Version v1.0.0
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michoel-lab/FindrCausalNetworkInferenceOnYeast: First release of Causal network inference tools
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Description
This python (and bash) code allows to reproduce the causal networks inference on differential gene expression data in yeast.
Results presented in an article on arXiv: https://arxiv.org/abs/2010.07417.
Relies on Findr: https://doi.org/10.1371/journal.pcbi.1005703. Uses data from Albert et al. 2018 (https://doi.org/10.7554/elife.35471) and Yeastract (http://www.yeastract.com/formregmatrix.php).
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michoel-lab/FindrCausalNetworkInferenceOnYeast-v1.0.0.zip
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(43.2 MB)
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md5:c1b6c4958c19b571a185f89c88cfd940
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Related works
- Is supplement to
- https://github.com/michoel-lab/FindrCausalNetworkInferenceOnYeast/tree/v1.0.0 (URL)