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Published December 16, 2020 | Version v1.0.0
Software Open

faulknerfalcons/Johnston-2020-Bootstrap: Scripts and data for Johnston and Faulkner 'A bootstrap approach is a superior statistical method for the comparison of non-normal data with differing variances.'

  • 1. John Innes Centre

Description

A bootstrap approach is a superior statistical method for the comparison of non-normal data with differing variances. Johnston and Faulkner, New Phytologist (2020) doi: 10.1111/nph.17159

Scripts for using our proposed bootstrap method:

  • medianBootstrap.R contains functions to replace wilcox.test() with medianBootstrap()
  • medianBootstrapToolbox.R contains an extended set of functions, allowing for the plotting of the null distribution, replacement of one-way ANOVAs, and a meanBootstrap().

A primer on how to use the medianBootstrap script is provided as a webpage (medianBootstrap.html) and R markdown (medianBootstrap.Rmd).

All the scripts and data used within the manuscript and figures used under a CC BY 4.0 licence.

Files

faulknerfalcons/Johnston-2020-Bootstrap-v1.0.0.zip

Files (308.1 kB)

Additional details

Funding

Plasmodesmata: genetic control of cell-to-cell communication during plant defence BB/L000466/1
UK Research and Innovation
Response BBS/E/J/000PR9796
UK Research and Innovation
INTERCELLAR – The role of the symplast in host-pathogen interactions – how does the symplastic, intercellular exchange of molecules regulate the outcomes of defence and infection? 725459
European Commission