Published November 19, 2020 | Version 2.0
Other Open

Supplementary information for the paper: Struct2IUPAC -- Transformer-based artificial neural network for the conversion between chemical notations

Description

Supplementary information for the preprint (Struct2IUPAC: A transformer-based model for chemical names generation) version 2.0. 

opsin_mistakes.csv  -- Structures that have been processed by OPSIN incorrectly.

IUPAC2Struct_mistakes.csv -- Structures that have been processed by our IUPAC2Smiles model incorrectly.

test_100000_uniform.csv  -- 100 000 structures from the test set. 

smiles_lens_1000.zip  -- Sets of SMILES of different lengths 

IUPAC2Struct-main.zip  -- the code from github (model is at the separate file iupac2smiles_model.pt, put it to "models" folder!)

iupac2smiles_model.pt -- binary dump of pytorch IUPAC2Struct model 

 

Files

IUPAC2Struct-main.zip

Files (221.8 MB)

Name Size Download all
md5:68029496134cc54552e5da20c99c6472
199.0 MB Download
md5:1e65b0f3068ae3eeeca757956984d88b
6.4 MB Preview Download
md5:98760f3313027efd302334e485093bb2
285.7 kB Preview Download
md5:740f15df1e9771ecdaeb47043ac4f909
119.1 kB Preview Download
md5:3b0a3e70b72170e7becf600f7f26e0ca
2.7 MB Preview Download
md5:723c5c7e2521e0e27490870318d8273b
13.3 MB Preview Download