CodiEsp guidelines

CodieEsp guidelines were employed for the annotation of the CodiEsp corpus, available at https://zenodo.org/record/3837305#.X7Y-WFlKg5k

Spanish-only. This is a support document to help in adapting the official Spanish coding guidelines to the controlled use case of coding clinical cases outside a hospital. 

The complete Spanish coding guidelines are found in the reference sections of this document and here:

• Diagnostico: http://www.mscbs.gob.es/estadEstudios/estadisticas/normalizacion/CIE10/CIE10ES_2018_norm_MANUAL_CODIF_DIAG_.pdf
• Procedimiento: http://www.mscbs.gob.es/estadEstudios/estadisticas/normalizacion/CIE10/CIE10ES_2018_norm_MANUAL_CODIFICACION_PROCEDIMIENTOS_EDICION_2018.pdf

Please cite if you use this dataset:

Antonio Miranda-Escalada, Aitor Gonzalez-Agirre, Jordi Armengol-Estapé and Martin Krallinger. Overview of automatic clinical coding: annotations, guidelines, and solutions for non-English clinical cases at CodiEsp track of CLEF eHealth 2020. In CLEF (Working Notes). 2020

@inproceedings{miranda2020overview,
  title={Overview of automatic clinical coding: annotations, guidelines, and solutions for non-english clinical cases at codiesp track of CLEF eHealth 2020},
  author={Miranda-Escalada, Antonio and Gonzalez-Agirre, Aitor and Armengol-Estap{\'e}, Jordi and Krallinger, Martin},
  booktitle={Working Notes of Conference and Labs of the Evaluation (CLEF) Forum. CEUR Workshop Proceedings},
  year={2020}
}

Resources:

• Web
• Citation: Miranda-Escalada, A., Farré, E., & Krallinger, M. (2020). Named entity recognition, concept normalization and clinical coding: Overview of the cantemist track for cancer text mining in spanish, corpus, guidelines, methods and results. In Proceedings of the Iberian Languages Evaluation Forum (IberLEF 2020), CEUR Workshop Proceedings.
• Gold Standard corpus
• Silver Standard corpus
• YouTube presentations
• Participant codes

For more information, please visit https://temu.bsc.es/codiesp/ or email us at encargo-pln-life@bsc.es

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