Published October 9, 2020 | Version 1
Dataset Open

PIBAC: Extensive cultivation of the pig gut microbiome identifies novel bacterial diversity and functions and enables tailored functional studies

  • 1. Helmholtz Centre for Infection Research

Description

In-depth cultivation of the pig gut microbiome towards novel bacterial diversity and tailored functional studies:

  • 780 MAGs from all-in-one assembly of 295 pig gut metagenomic samples (Xiao, 2016)
  • 38 isolates representing novel species (single draft genomes)
  • representing in total 617 species (hqMAGs-dereplicated_genomes, comp>90%, con<5%

More information you can find here:

https://github.com/tillrobin/PIBAC

https://www.dsmz.de/pibac

 

External study providing data:

Xiao, Liang, et al. "A reference gene catalogue of the pig gut microbiome." Nature microbiology 1.12 (2016): 16161. https://doi.org/10.1038/nmicrobiol.2016.161 

Files

Files (1.4 GB)

Name Size Download all
md5:fc5ba0e99d602652f742d29cbd84e395
127.2 kB Download
md5:55cc166a8d1076321c9a8e2485886d00
407.5 MB Download
md5:38ef583ae00b71da5771e18f4c5e34e6
1.0 GB Download