Published October 2, 2020
| Version v1
Dataset
Open
Supplementary data (simulated metagenome set 3) to accompany "phyloFlash – Rapid SSU rRNA profiling and targeted assembly from metagenomes"
Authors/Creators
- 1. Max Planck Institute for Marine Microbiology
- 2. University of Colorado, Denver Anschutz Medical Campus
Description
Comparison of SSU rRNA read extraction and targeted assembly from simulated shotgun metagenome of closely related Bacteorides strains.
The phyloFlash software is available from https://github.com/HRGV/phyloFlash. Examples were generated with phyloFlash v3.3b.
Files
Files
(74.1 MB)
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md5:d8c0c6739056bba8c3dedf9a0d9e07e8
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Additional details
Related works
- Cites
- Journal article: 10.1038/s41587-018-0008-8 (DOI)
- Is supplement to
- Preprint: 10.1101/521922 (DOI)
- Software: 10.5281/zenodo.1327399 (DOI)