Published September 14, 2020 | Version 1
Dataset Open

Multiple sequence alignment of DNA-A sequences from ACMBFV, ACMV, CMMGV, EACMCV, EACMKV, EACMMV, EACMV, EACMZV, SACMV, ICMV, SLCMV (11 species)

Creators

  • 1. Rutgers University

Description

All full-length DNA-A sequences available in GenBank as of July 2019 were downloaded via the Taxonomy Browser interface. Sequence names were normalized/simplified and orientations of these circular sequences were standardized to begin at the replication origin nick site. Sequences were aligned with MUSCLE and alignments were manually adjusted with SeAl (A. Rambaut) and AliView (A. Larsson).

Files

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Additional details

Funding

U.S. National Science Foundation
PIRE: U.S.-East Africa Research and Education Partnership: Cassava mosaic disease - A paradigm for the evolution of insect-transmitted plant virus pathosystems 1545553