Lesson Open Access
Introduction to differential gene expression analysis using RNA-seq
Dündar, Friederike; Skrabanek, Luce; Zumbo, Paul
Comprehensive introduction to the processing and analysis of bulk RNA-seq data including basic information about Illumina-based short read sequencing, common file formats (FASTQ, SAM/BAM, BED, ...) and quality controls. Contains ready-to-use UNIX and R code; covers the most common application of bulk RNA-seq to identify genes that are differentially expressed when comparing two conditions.
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(11.5 MB)
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Intro2RNAseq.pdf
md5:b5bedbe6ec64de6227f828f0c8cc5f85 |
11.5 MB | Download |
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Indexed in
- Publication date:
- September 1, 2015
- DOI:
-
- Keyword(s):
- RNA-seq; bioinformatics; differential gene expression
- License (for files):
- Creative Commons Attribution 4.0 International