Published August 5, 2020
| Version v3.0.0
Software
Open
biowdl/gatk-preprocess: Release 3.0.0
Description
- Increase the time needed for baserecalibration
- Update default docker images.
- The scatter regions has been removed. Regions for scattering need to be provided externally. This is more efficient for pipelines that work on multiple samples.
- Tasks were updated to contain the
time_minutesruntime attribute and associatedtimeMinutesinput, describing the maximum time the task will take to run. - Only scatter when the number of scatters turns out to be 1.
Files
biowdl/gatk-preprocess-v3.0.0.zip
Files
(908.3 kB)
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md5:5bb6318c8ae72ee305e0a58fa2d2aa86
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Additional details
Related works
- Is supplement to
- https://github.com/biowdl/gatk-preprocess/tree/v3.0.0 (URL)