Dataset Open Access
SARS-COV2 Spike Glycopeptide Mass-Retention Time PCDL database
Chalk, R; Greenland, W.; Moreira, T.; Coker, J.; Mukhopadhyay, S.; Williams, E.; Manning, C.; Bohstedt, T.; McCrorie, R.; Fernandez-Cid, A.; Burgess-Brown, N.
Contains accurate mass, HPLC retention time, peptide sequence, glycan structure and mass spectra for over 400 glycopeptides from elastase digestion of SARS-COV2 Spike antigen and receptor binding domain. The database is used as part of the Mass-Retention Time Fingerprinting method to characterise Spike glycans as described in the BioRxiv preprint “Identification, Mapping and Relative Quantitation of SARS-Cov2 Spike Glycopeptides by Mass-Retention Time Fingerprinting”
Files
(1.3 MB)
| Name | Size | |
|---|---|---|
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200713_Spike_MRTF_database.cdb
md5:d330f5ae35118a43701237ac363aeb88 |
1.2 MB | Download |
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200713_Spike_MRTF_database.xlsx
md5:7101ee2ddf962392f3a3287a1f54cf4c |
27.9 kB | Download |
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downloads
| All versions | This version | |
|---|---|---|
| Views | 1,205 | 1,205 |
| Downloads | 93 | 93 |
| Data volume | 41.4 MB | 41.4 MB |
| Unique views | 1,153 | 1,153 |
| Unique downloads | 70 | 70 |
Indexed in
- Publication date:
- July 23, 2020
- DOI:
-
- Keyword(s):
- SARS-Cov2 Spike RBD Glycoprotein Glycopeptide Glycan Mass Spectrometry HPLC Database
- Grants:
-
European Commission:
Wellcome Trust:
- A UK Hub to Catalyse Open Target Discovery. (106169)
- Communities:
- License (for files):
- Creative Commons Attribution 4.0 International