Dataset Open Access

Evaluation datasets and pre-computed scores for: "CAPICE: a computational method for Consequence-Agnostic Pathogenicity Interpretation of Clinical Exome variations"

ShuangLi

CAPICE is a computational method for predicting the pathogenicity of SNVs and InDels.

This new repository added index for CAPICE v1.0 (build37) precomputed files.

Repository description:

1) "paper_datasets.tar.gz" contains all datasets used in the CAPICE paper;

2) "capice_v1.0_build37_indels.tsv.gz" contains the precomputed scores for InDels in genome build 37

3) "capice_v1.0_build37_indels.tsv.gz.tbi" contains the index for file"capice_v1.0_build37_indels.tsv.gz"

4) "capice_v1.0_build37_snvs.tsv.gz" contains the precomputed scores for all possible SNVs in genome build 37

5) "capice_v1.0_build37_snvs.tsv.gz.tbi" contains the index for file "capice_v1.0_build37_snvs.tsv.gz"

 

Files (29.2 GB)
Name Size
capice_v1.0_build37_indels.tsv.gz
md5:009653fb31c7f20d817900c58fe7e57a
471.4 MB Download
capice_v1.0_build37_indels.tsv.gz.tbi
md5:d3b1ad409d29a79cea6b468383c53944
1.1 MB Download
capice_v1.0_build37_snvs.tsv.gz
md5:fa74141484112016d1d35457c8296477
28.8 GB Download
capice_v1.0_build37_snvs.tsv.gz.tbi
md5:8dd17427ba828c735d69f6d33a80bd0b
2.5 MB Download
paper_datasets.tar.gz
md5:6f2b07409d9d86746773370670ceb0e0
17.1 MB Download
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