Published October 31, 2019
| Version v4
Dataset
Open
Evaluation datasets and pre-computed scores for: "CAPICE: a computational method for Consequence-Agnostic Pathogenicity Interpretation of Clinical Exome variations"
Creators
- 1. Genomics Coordination Center & Dept. of Genetics, University of Groningen, University Medical Center Groningen, Groningen, the Netherlands
Description
CAPICE is a computational method for predicting the pathogenicity of SNVs and InDels.
This new repository added index for CAPICE v1.0 (build37) precomputed files.
Repository description:
1) "paper_datasets.tar.gz" contains all datasets used in the CAPICE paper;
2) "capice_v1.0_build37_indels.tsv.gz" contains the precomputed scores for InDels in genome build 37
3) "capice_v1.0_build37_indels.tsv.gz.tbi" contains the index for file"capice_v1.0_build37_indels.tsv.gz"
4) "capice_v1.0_build37_snvs.tsv.gz" contains the precomputed scores for all possible SNVs in genome build 37
5) "capice_v1.0_build37_snvs.tsv.gz.tbi" contains the index for file "capice_v1.0_build37_snvs.tsv.gz"