Dataset Open Access
Evaluation datasets and pre-computed scores for: "CAPICE: a computational method for Consequence-Agnostic Pathogenicity Interpretation of Clinical Exome variations"
ShuangLi
CAPICE is a computational method for predicting the pathogenicity of SNVs and InDels.
This new repository added index for CAPICE v1.0 (build37) precomputed files.
Repository description:
1) "paper_datasets.tar.gz" contains all datasets used in the CAPICE paper;
2) "capice_v1.0_build37_indels.tsv.gz" contains the precomputed scores for InDels in genome build 37
3) "capice_v1.0_build37_indels.tsv.gz.tbi" contains the index for file"capice_v1.0_build37_indels.tsv.gz"
4) "capice_v1.0_build37_snvs.tsv.gz" contains the precomputed scores for all possible SNVs in genome build 37
5) "capice_v1.0_build37_snvs.tsv.gz.tbi" contains the index for file "capice_v1.0_build37_snvs.tsv.gz"
| Name | Size | |
|---|---|---|
|
capice_v1.0_build37_indels.tsv.gz
md5:009653fb31c7f20d817900c58fe7e57a |
471.4 MB | Download |
|
capice_v1.0_build37_indels.tsv.gz.tbi
md5:d3b1ad409d29a79cea6b468383c53944 |
1.1 MB | Download |
|
capice_v1.0_build37_snvs.tsv.gz
md5:fa74141484112016d1d35457c8296477 |
28.8 GB | Download |
|
capice_v1.0_build37_snvs.tsv.gz.tbi
md5:8dd17427ba828c735d69f6d33a80bd0b |
2.5 MB | Download |
|
paper_datasets.tar.gz
md5:6f2b07409d9d86746773370670ceb0e0 |
17.1 MB | Download |
| All versions | This version | |
|---|---|---|
| Views | 1,482 | 938 |
| Downloads | 12,824 | 8,962 |
| Data volume | 312.7 TB | 224.2 TB |
| Unique views | 1,165 | 808 |
| Unique downloads | 1,564 | 1,126 |
- Publication date:
- October 31, 2019
- DOI:
-
- Keyword(s):
- Variant Pathogenicity Prediction Machine Learning Exome Sequencing Molecular Consequence Allele Frequency Clinical Genetics Genome Diagnostics
- License (for files):
- Creative Commons Zero v1.0 Universal