TomKellyGenetics/graphsim: Version 1.0.0
Description
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Major stable release: note changes to results are possible! (legacy code should run without breaking)
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Expanded documentation and examples (consolidate into fewer vignettes for clarity)
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Resolves errors handling inhibiting edges
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Efficiently compute a state matrix from a vector of edge properties from paths
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Enables passing "sd" (standard deviation) to alter covariance of Sigma matrix
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Adds methods for computing using Laplacian matrices
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Adds function to compute simulations directly from an adjacency matrix
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Migrates computing states to sigma (these matrices include inhibitions)
See JOSS review for details.
Files
TomKellyGenetics/graphsim-v1.0.0.zip
Files
(10.8 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/TomKellyGenetics/graphsim/tree/v1.0.0 (URL)