Dataset Open Access

Tissue-mimics example datasets for Icy protocols

Corinne Lorenzo; Jordi Andilla

This upload contains three image datasets to test the Icy protocols P1 to P3 and plugin metroloSPIM described in Andilla, J., Jorand, R., Olarte, O. et al. Imaging tissue-mimic with light sheet microscopy: A comparative guideline. Sci Rep 7, 44939 (2017). https://doi.org/10.1038/srep44939  

MCTS_H2B-FP.tif: tissue-mimics example dataset to test Icy protocol P1 – Detect tissue mimics and crop 3D sub-volume

MCTS_H2B-FP_crop.tif: crop of MCTS_H2B-FP.tif (tissue-mimics example dataset) to test Icy protocol P2 – SNR and contrast measurements 

MCTS_Beads.tif: fluorescent beads example dataset to test Icy protocol P3 – Characterize the PSF from beads in 3D 

Files (812.2 MB)
Name Size
MCTS_Beads.tif
md5:af9300b0f08ea5080513e1820a40016d
247.8 MB Download
MCTS_H2B-FP.TIF
md5:2fdbd551e1211219e4fde293e10a0573
506.9 MB Download
MCTS_H2B-FP_crop.tif
md5:c7d240f88a1251377a11881b993c24f9
57.6 MB Download
  • Andilla, J., Jorand, R., Olarte, O. et al. Imaging tissue-mimic with light sheet microscopy: A comparative guideline. Sci Rep 7, 44939 (2017). https://doi.org/10.1038/srep44939

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