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Cantemist guidelines: neoplasms morphology annotation and mapping to CIEO-3

Farré, Eulàlia; González, Gloria; Krallinger, Martin; Mas, Toni; Miranda-Escalada, Antonio

Important: CANTEMIST corpus is available at: https://zenodo.org/record/3878488

 

For more information, visit https://temu.bsc.es/cantemist/?p=4362

The Cantemist corpus was manually annotated by clinical experts following the Cantemist guidelines.  These guidelines contain rules for annotating morphology neoplasms in Spanish oncology clinical cases; as well as for mapping these annotations to CIEO-3 (Spanish version of ICD-O-3).

Guidelines were created de novo by clinical experts in three phases:

  •  First, a zero version of guidelines after the clinical experts reviewed neoplasm morphology annotations in SPACCC corpus see Codiesp guidelines(https://zenodo.org/record/3730567).
  •  Second, a stable version of guidelines was reached while annotating sample sets of Cantemist corpus iteratively until quality control was satisfactory.
  •  Third, guidelines are iteratively refined as manual annotation continues.

Funded by the Plan de Impulso de las Tecnologías del Lenguaje (Plan TL).
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