Published February 7, 2017
                      
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                  A DNA barcode-based survey of terrestrial arthropods in the Society Islands of French Polynesia: host diversity within the SymbioCode Project
Creators
- 1. 9 Quartier de la Glacière, 29900 Concarneau, France. & Email: thibault.ramage@hotmail.fr & urn:lsid:zoobank.org:author:8DE31F66-13BF-4516-A205-60F2EA39E3DD
- 2. Laboratoire de Biométrie & Biologie Evolutive, CNRS - Université Lyon 1, Bat. Mendel, 43 Boulevard du 11 November, 69622 Villeurbanne, France. & CIRI, International Center for Infectiology Research, Lyon, France. & Email: patmsimoes@gmail.com
- 3. Laboratoire de Biométrie & Biologie Evolutive, CNRS - Université Lyon 1, Bat. Mendel, 43 Boulevard du 11 November, 69622 Villeurbanne, France. & Email: gmialdea@gmail.com
- 4. Laboratoire de Biométrie & Biologie Evolutive, CNRS - Université Lyon 1, Bat. Mendel, 43 Boulevard du 11 November, 69622 Villeurbanne, France.
- 5. University of Helsinki, Metapopulation Research Centre, Department of Biosciences, P.O. Box 65, Viikinkaari 1, 00014 Helsinki, Finland. & Email: duplouyanne@yahoo.fr
- 6. 38 Rue des Primevère, 35160 Le Verger, France. & Email: rousse.pascal@wanadoo.fr
- 7. Richard B. Gump South Pacific Research Station, University of California Berkeley, BP 244 Maharepa, 98728 Moorea, French Polynesia. & Email: neiltahiti@gmail.com
- 8. Richard B. Gump South Pacific Research Station, University of California Berkeley, BP 244 Maharepa, 98728 Moorea, French Polynesia. & Environmental Science, Policy and Management, University of California, Berkeley, California 94720, USA & Email: roderick@berkeley.edu Deceased
- 9. Laboratoire de Biométrie & Biologie Evolutive, CNRS - Université Lyon 1, Bat. Mendel, 43 Boulevard du 11 November, 69622 Villeurbanne, France. & Corresponding author: sylvain.charlat@univ-lyon1.fr
Description
      Ramage, Thibault, Martins-Simoes, Patricia, Mialdea, Gladys, Allemand, Roland, Duplouy, Anne, Rousse, Pascal, Davies, Neil, Roderick, George K., Charlat, Sylvain (2017): A DNA barcode-based survey of terrestrial arthropods in the Society Islands of French Polynesia: host diversity within the SymbioCode Project. European Journal of Taxonomy 272: 1-13, DOI: 10.5852/ejt.2017.272
    
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Additional details
Identifiers
- LSID
- urn:lsid:plazi.org:pub:FF83FFE02E46FFBA7459FF9094667864
            
              References
            
          
        - Anisimova M. & Gascuel O. 2006. Approximate likelihood-ratio test for branches: a fast, accurate, and powerful alternative. Systematic Biology 55: 539-552.
- Bailly-Bechet M., Simoes P., Szollosi G., Mialdea G., Sagot M.-F. & Charlat S. In press. How long does Wolbachia remain on board? Molecular Biology and Evolution.
- Check E. 2006. Treasure island: pinning down a model ecosystem. Nature 439: 378-379. http://dx.doi. org/10.1038/439378a
- Dierkens M. & Charlat S. 2009. Contribution a la connaissance des araignees des iles de la Societe (Polynesie francaise). Revue Arachnologique 17: 63-81.
- Dierkens M. & Ramage T. 2016. Deuxieme contribution a la connaissance des araignees de Polynesie francaise. Bulletin mensuel de la Societe Linneenne de Lyon 85: 134-172.
- Fairmaire L.M.H. 1849. Essai sur les Coleopteres de la Polynesie. Revue et Magasin de Zoologie 2: 277-291, 352-365, 410-422, 445-460, 504-516, 550-559.
- Fairmaire L.M.H. 1850. Essai sur les Coleopteres de la Polynesie. Revue et Magasin de Zoologie 2: 50-64, 115-122, 181-185.
- Folmer O., Black M., Hoeh W., Lutz R. & Vrijenhoek R. 1994. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology 3: 294-299.
- Gillespie R.G. & Roderick G.K. 2002. Arthropods on islands: colonization, speciation, and conservation. Annual Review of Entomology 47: 595-632.
- Gressitt J.L. 1956. Some distribtion patterns of Pacific island faunae. Systematic Zoology 5: 11-47.
- Gressitt J.L. & Gressitt M.K. 1962. An improved Malaise trap. Pacific Insects 4: 87-90.
- Han M.V. & Zmasek C.M. 2009. phyloXML: XML for evolutionary biology and comparative genomics. BMC Bioinformatics 10: e356. http://dx.doi.org/10.1186/1471-2105-10-356
- Hurst G.D. & Jiggins F.M. 2005. Problems with mitochondrial DNA as a marker in population, phylogeographic and phylogenetic studies: the effects of inherited symbionts. Proceedings of the Royal Society B 272: 1525-1534.
- Huson D.H. & Scornavacca C. 2012. Dendroscope 3: an interactive tool for rooted phylogenetic trees and networks. Systematic Biology 61: 1061-1067. http://dx.doi.org/10.1093/sysbio/sys062
- Katoh K. & Standley D.M. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution 30: 772-780. http://dx.doi.org/10.1093/ molbev/mst010
- Kearse M., Moir R., Wilson A., Stones-Havas S., Cheung M., Sturrock S., Buxton S., Cooper A., Markowitz S., Duran C., Thierer T., Ashton B., Meintjes P. & Drummond A. 2012. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28: 1647-1649. http://dx.doi.org/10.1093/bioinformatics/bts199
- Lamarre G.P.A., Molto Q., Fine P.V.A. & Baraloto C. 2012. A comparison of two common flight interception traps to survey tropical arthropods. ZooKeys 216: 43-55. http://dx.doi.org/10.3897/ zookeys.216.3332
- Meier R., Shiyang K., Vaidya G. & Ng P.K.L. 2006. DNA barcoding and taxonomy in Diptera: a tale of high intraspecific variability and low identification success. Systematic Biology 55: 715-728. http:// dx.doi.org/10.1080/10635150600969864
- Miller S. 1996. Biogeography of Pacific insects and other terrestrial invertebrates: a status report. In: Keast A. & Miller S. (eds) The Origin and Evolution of Pacific Island Biotas, New Guinea to Eastern Polynesia: Patterns and Processes: 463-475. Academic Publishers, Amsterdam.
- Price M.N., Dehal P.S. & Arkin A.P. 2010. FastTree 2 - Approximately maximum-likelihood trees for large alignments. PLoS ONE 5 (3): e9490. http://dx.doi.org/10.1371/journal.pone.0009490
- Ramage T. In press. Checklist of the terrestrial and freshwater arthropods of French Polynesia (Chelicerata; Myriapoda; Crustacea; Hexapoda). Zoosystema.
- Ramage T. & Gourves J. 2016. Un nouveau Scutelleridae pour la Polynesie francaise, Calliphara bifasciata White, 1839 (Hemiptera). Bulletin de la Societe Entomologique de France, in press.
- Ramage T. & Kimsey L.S. 2015. The Aculeata of French Polynesia. IV. First record of Chrysis angolensis (Hymenoptera, Chrysididae). Bulletin de la Societe Entomologique de France 120: 209-211.
- Ramage T., Charlat S. & Jacq F. 2015. The Aculeata of French Polynesia. III. Sphecidae, with the record of three new species for the Society Islands (Hymenoptera). Bulletin de la Societe Entomologique de France 120: 157-163.
- Ratnasingham S. & Hebert P.D.N. 2013. A DNA-based registry for all animal species: the Barcode Index Number (BIN) system. PLoS ONE 8 (7): e66213. http://dx.doi.org/10.1371/journal.pone.0066213
- Rousse O., Ramage T. & Charlat S. In prep. Ichneumonid wasps of French Polynesia: synopsis, illustrated key, and description of 10 new species.
- Whittaker R. & Fernandez-Palacios J. 2009. Island Biogeography. Ecology, Evolution, and Conservation. Second Edition. Oxford University Press, Oxford.
- Wilson J.J., Rougerie R., Schonfeld J., Janzen D.H., Hallwachs W., Hajibabaei M., Kitching I.J., Haxaire J. & Hebert P.D. 2011. When species matches are unavailable are DNA barcodes correctly assigned to higher taxa? An assessment using sphingid moths. BMC Ecology 11: e18. http://dx.doi. org/10.1186/1472-6785-11-18