Published February 3, 2017 | Version v2.5.0
Software Open

UMCUGenetics/IAP: v2.5.0

Creators

  • 1. University Medical Center Utrecht

Description

New features:

  • IAP modules in own namespace
  • Initial implementation of bcftools roh
  • Sync IAP with Harwtig Pipeline v1.10 and v1.11
    • Add VT normalize to freebayes analysis
    • Update freebayes filter script
    • Update somatic melt script
    • Check fastq.gz pattern before submitting jobs
  • Fingerprint module
  • Single sample vcf output optional in vcf utils

Bug fixes:

  • Allow only one mappability track in freec analysis
  • Add --temporary-directory to vcf-sort in delly analysis

Files

IAP-2.5.0.zip

Files (174.8 kB)

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md5:ad1d82e9ff6afcf10e92c730fa63f393
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Additional details

Related works

Is supplement to
https://github.com/UMCUGenetics/IAP/tree/v2.5.0 (URL)