Software Open Access
Code used in article "CSD-based metric for along-tract statistical analysis in primary motor tumor patients".
Fekonja, Lucius Samo;
Wang, Ziqian;
Aydogan, Dogu Baran;
Roine, Timo;
Engelhardt, Melina;
Dreyer, Felix R.;
Vajkoczy, Peter;
Picht, Thomas
Here we publish the code used in our "CSD-based metric for along-tract statistical analysis in primary motor tumor patients." article.
The code for MRtrix3 is based on version 3.0_RC3_latest-66-g323bc8ac 64 bit release version, built Dec 11 2019 (https://github.com/MRtrix3/mrtrix3).
The code for R is based on RStudio Version 1.2.5019, with R version 3.6.1 (2019-07-05) -- "Action of the Toes", Copyright (C) 2019. The R Foundation for Statistical Computing. Platform: x86_64-apple-darwin15.6.0 (64-bit).
The authors acknowledge the support of the Cluster of Excellence Matters of Activity. Image Space Material funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany´s Excellence Strategy – EXC 2025.
Files
(12.7 kB)
| Name | Size | |
|---|---|---|
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shell_script_adc_fa_fixel_image_construction.sh
md5:4d5f14194d82f27f28ad85e069386f6a |
3.1 kB | Download |
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shell_script_tms_and_tractography.sh
md5:47f16dee60dd405ad1aae1cae14224ca |
982 Bytes | Download |
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stat_analysis.R
md5:e5e5c69458040642e55245087de56874 |
8.6 kB | Download |
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| All versions | This version | |
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| Views | 213 | 17 |
| Downloads | 101 | 8 |
| Data volume | 347.1 kB | 25.9 kB |
| Unique views | 175 | 17 |
| Unique downloads | 57 | 3 |
Indexed in
- Publication date:
- March 29, 2020
- DOI:
-
- Keyword(s):
- Tractography Neuroimaging Corticospinal tract Glioma Motor function Diffusion weighted MRI MRI Along tract statistical analysis
- Related identifiers:
- References
- https://github.com/MRtrix3/mrtrix3 (Software documentation)
- 10.1016/j.neuroimage.2019.116137 (Journal article)
- Communities:
- License (for files):
- Creative Commons Attribution 4.0 International