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Code used in article "CSD-based metric for along-tract statistical analysis in primary motor tumor patients".

Fekonja, Lucius Samo; Wang, Ziqian; Aydogan, Dogu Baran; Roine, Timo; Engelhardt, Melina; Dreyer, Felix R.; Vajkoczy, Peter; Picht, Thomas

Here we publish the code used in our "CSD-based metric for along-tract statistical analysis in primary motor tumor patients." article.

The code for MRtrix3 is based on version 3.0_RC3_latest-66-g323bc8ac 64 bit release version, built Dec 11 2019 (https://github.com/MRtrix3/mrtrix3).

The code for R is based on RStudio Version 1.2.5019, with R version 3.6.1 (2019-07-05) -- "Action of the Toes", Copyright (C) 2019. The R Foundation for Statistical Computing. Platform: x86_64-apple-darwin15.6.0 (64-bit).

 

The authors acknowledge the support of the Cluster of Excellence Matters of Activity. Image Space Material funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany´s Excellence Strategy – EXC 2025.
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shell_script_adc_fa_fixel_image_construction.sh
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shell_script_tms_and_tractography.sh
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stat_analysis.R
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