Published March 20, 2020 | Version v1
Journal article Open

Developing Standards for Improved Data Quality and for Selecting Fit for Use Biodiversity Data

  • 1. Australian Biodiversity Information Services, Ballan, Australia
  • 2. The Atlas of Living Australia, Carlton, Australia
  • 3. VertNet, Buenos Aires, Argentina
  • 4. Museum of Vertebrate Zoology, University of California, Berkeley, United States of America
  • 5. Museum of Comparative Zoology, Harvard University, Cambridge, MA, United States of America
  • 6. Atlas of Living Australia, Canberra, Australia
  • 7. University of Sao Paulo, Sao Paulo, Brazil
  • 8. iDigBio, Gainesville, United States of America
  • 9. Department of Biodiversity, Conservation and Attractions, Western Australian Herbarium, Kensington, WA, Australia
  • 10. Global Biodiversity Information Facility - Secretariat, Copenhagen Ø, Denmark
  • 11. U.S. Geological Survey, Lakewood, CO, United States of America

Description

The quality of biodiversity data publicly accessible via aggregators such as GBIF (Global Biodiversity Information Facility), the ALA (Atlas of Living Australia), iDigBio (Integrated Digitized Biocollections), and OBIS (Ocean Biogeographic Information System) is often questioned, especially by the research community.

The Data Quality Interest Group, established by Biodiversity Information Standards (TDWG) and GBIF, has been engaged in four main activities: developing a framework for the assessment and management of data quality using a fitness for use approach; defining a core set of standardised tests and associated assertions based on Darwin Core terms; gathering and classifying user stories to form contextual-themed use cases, such as species distribution modelling, agrobiodiversity, and invasive species; and developing a standardised format for building and managing controlled vocabularies of values.

Using the developed framework, data quality profiles have been built from use cases to represent user needs. Quality assertions can then be used to filter data suitable for a purpose. The assertions can also be used to provide feedback to data providers and custodians to assist in improving data quality at the source. A case study, using two different implementations of tests and assertions based around the Darwin Core "Event Date" terms, were also tested against GBIF data, to demonstrate that the tests are implementation agnostic, can be run on large aggregated datasets, and can make biodiversity data more fit for typical research uses.

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