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Published March 24, 2020 | Version v1
Software Open

Software fP-CMC: Fast Patch-­based Continuous Min-Cut segmentation

  • 1. Computer Science Department, Technical University of Cluj-­‐Napoca (UTCN)
  • 2. Radiology Department, Center for Biomedical Imaging, Lausanne University and University Hospital

Description

This software presents a semi-­‐supervised segmentation on framework for B-­‐mode ultrasound imaging. It is applicable to any kind of target and imaging settings. Our methodology uses a graph of image patches to represent the ultrasound image and user-­‐assisted initialization with labels, which acts as soft priors. The segmentation problem is formulated as a continuous minimum cut problem and solved with an efficient optimisation algorithm.

Works using fP-­‐CMC should cite and it is based on the journal article below:

Anca Ciurte, Xavier Bresson, Olivier Cuisenaire, Nawal Houhou, Sergiu Nedevschi, Jean-­‐Philippe Thiran, Meritxell Bach Cuadra, Semi-­‐Supervised Segmentation of Ultrasound Images based on Patch Representation and Continuous Min Cut. Plos One, 9(7), p. e100972, 2014https://doi.org/10.1371/journal.pone.0100972

This work is supported by PRODOC Project of Technical University of Cluj-Napoca and by the Center for Biomedical Imaging (CIBM) of the Geneva-Lausanne Universities and EPFL, and the foundations Leenaards and Louis-Jeantet, and by the FNS-205321-141283 and CTI-13741.1 funds.

Notes

Distributed under License: GPLv3 -­‐ 29 June 2007, check the README_HOWTO_fP_CMC.pdf file.

Files

fP-CMC-PublicCode.zip

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Additional details

Related works

Is supplement to
Journal article: 10.1371/journal.pone.0100972 (DOI)

Funding

Novel Image Processing Methods for Fetal MR Imaging: 3D Reconstruction and Segmentation with Soft Priors 205321_141283
Swiss National Science Foundation