jdblischak/workflowr: workflowr 1.6.1
Creators
- 1. University of Chicago
- 2. @storyscript
- 3. UC-Denver Anschutz Medical Campus
- 4. @weecology, Univ of Florida
- 5. Agios Pharmaceuticals
Description
This patch release of workflowr includes minor improvements, updated documentation, bug fixes, and lots of internal refactoring.
Minor improvementsWorkflowr functions check if the working directory exists (idea from @pcarbo, #185)
wflow_use_github()
can now create repositories for GitHub organizations using the new argumentorganization
. However, GitLab Groups should still be specified with the argumentusername
forwflow_use_gitlab()
(bug report from @stephens999, #186)Any workflowr function that prompts for user input will continue to re-prompt until valid input has been entered (or canceled by hitting the key
Esc
) (idea from @pcarbo)All functions that commit to the Git repository first check for the availability of the Git variables user.name and user.email (either global or local), which are required for creating a commit (#85)
The workflowr icon is displayed in browser tabs of workflowr websites (idea from @pcarbo)
Document that GitLab.com provides private repositories with access control to the source code repository and the website (#187)
Update URL to RStudio-specific instructions for installing pandoc (bug report from @PietrH, #190)
Document in the FAQ vignette how to include an external image using an absolute URL to the image hosted on another website (idea from @JiaxiangBU, #159)
Document how to embed Shiny apps with
knitr::include_app()
and shinyapps.io (idea from @rsimon64, #130)Update the FAQ on including external images to account for the breaking change in
knitr::include_graphics()
introduced in knitr version 1.28 (bug report from @ditordccaa, #103)Add FAQ entry on how to use a Git hosting site that uses the HTTP protocol (idea from @antass, #163)
- Fix Windows-specific bug that caused the table of past versions to be missing from the workflowr report (bug introduced in version 1.5.0)
Internal refactoring for increased speed and improved error handling of input arguments
Check for class with
inherits()
(#189)Switch to use pandoc option
--include-in-header
to insert workflowr-specific CSS and other metadata (surprisingly--include-before-body
works fine)
Files
jdblischak/workflowr-v1.6.1.zip
Files
(871.3 kB)
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Additional details
Related works
- Is supplement to
- https://github.com/jdblischak/workflowr/tree/v1.6.1 (URL)